Greetings,
When performing a BET extraction using fsl 4.0's bet, an error is
thrown and off center images are produced. This behavior is not seen
when the same images are processed using fsl 3.3's bet.
Command: bet 5088_MPRAGE 5088_MPRAGE_bet2_james_4.0 -m -n
Error: ** WARNING: posn not header size (0, 348)
As a side note, fsl 4.0's fslhd produces the same result (I suspected
this error relates to a missing or malformed header field).
Link to overlay comparing fsl 3.3 and fsl 4.0's output:
http://airto.hosted.ats.ucla.edu/~kyle/pastedGraphic1.tiff
Any insight into the root of the problem (and fixes) appreciated.
Regards,
James Kyle
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