Hello FSL users,
I am computing radial diffusivity as the voxelwise average of L2 and L3 with fslmaths. When I go
through the procedure for running tbbs on my RD data (non_FA), everything goes fine until the
skeletonization step and then I get the following error.
Any help would be much appreciated.
Thanks
merging all upsampled RD images into single 4D image
projecting all_RD onto mean FA skeleton
Image Exception : #5 :: Out of Bounds (time index)
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
/usr/local/fsl/bin/tbss_non_FA: line 104: 6506 Abort trap ${FSLDIR}/bin/tbss_skeleton -i
mean_FA -p $thresh mean_FA_skeleton_mask_dst ${FSLDIR}/data/standard/LowerCingulum_1mm
all_FA all_${ALTIM}_skeletonised -a all_$ALTIM
now run stats - for example:
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