Hi Bhargav,
the command your typing seems fine and, looking at the
name of your images, you seem to have run
tbss_1_preproc on both structural and FA maps, am I
right to assume so?
If so, what happened when you ran areg? Did you have
the same type of error message?
Cheers,
Gwenaelle
--- Bhargav Kumar Errangi <[log in to unmask]> a
écrit :
> Hi,
> Thank you very much for your reply.
> Yes, nreg runs on our system. My basic motto is to
> apply non-linear
> registration to co-register structural data to DTI
> data for ROI analysis.
> Our data is in analyze format. Could you please tell
> me the parameters/any
> additional settings which iam missing before running
> the script.
>
> nreg FA_FAi.hdr str_FAi.hdr -dofin
> struc2diff_affine.dof -dofout
> struc2diff_nonlinear.dof -ds 20 -Tp 0 -parameter
> usr/local/fsl/bin/DR/nonlinearCC.par
>
> Iam not clear about converting images to short?. Is
> there anything related
> to this that iam missing here?
> Thank you very much.
> Bhargav.
>
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