Hi,
On 12 Oct 2007, at 18:06, Markus Gschwind wrote:
> Hi FSLers!
>
> I am struggling with the DTI Mode of FSL:
>
> 1.
> I can open FA data in FSLveiw 2D nicely, but I cannot open any FA-
> data (produced in FSL3 on Cygwin) in FSLview 3D. That means: It
> atually works but I just don't see anything! Is that normal?
Have you tried setting the FSLView display range to 0:1?
> 2.
> I installed FSL 4 in a vmplayer. Atotest with the testdata worked
> fine.
> After Eddy corrent-correction (30 volumes of 30 have been
> processed. "Done!") it tells me ERROR:
> window name "prompt" already exists in parent
> window name "prompt" already exists in parent
> while executing
> "toplevel .prompt -borderwidth 5"
> (procedure "MxPause" line 4)
> invoked from within
> "MxPause " Done! " "
> (procedure "fdt:apply" line 313)
> invoked from within
> "fdt:apply .fdt keep"
> invoked from within
> ".fdt.apply invoke"
> ("uplevel" body line 1)
> invoked from within
> "uplevel #0 [list $w invoke]"
> (procedure "tk::ButtonUp" line 22)
> invoked from within
> "tk::ButtonUp .fdt.apply"
> (command bound to event)
> and: Errors: terminate called after throwing an instance on
> 'Newmat::InompatibleDimensionsException'.
I think we'd need to see more info about what aspects of the analysis
worked and what didn't? Possibly you had one of the popup windows
still up when it was supposed to have been closed? Sounds like the
analysis did run though?
Cheers.
> 3. Trying Bedpostx on another data I got THE SAME error message.
>
> What is wrong? How can I fix that?
>
> Thank you very much!
> Cheers,
> Markus
>
> --
>
> Markus Gschwind, M.D.
> Laboratory for Neurology and Imaging of Cognition
> Dept of Neurosciences
> University Medical Center (CMU)
> 1 Michel-Servet - 1211 GENEVA - CH
>
> Tel 0041 (0) 22 379 5324
> Fax 0041 (0) 22 379 5402
> email: [log in to unmask]
> http://labnic.unige.ch
------------------------------------------------------------------------
---
Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
------------------------------------------------------------------------
---
|