Hi - yes, looks like your input data is not valid NIFTI. What do you
get with:
fslhd net1
fslstats net1 -r -R
Cheers.
On 9 Oct 2007, at 18:02, Teena Moody wrote:
> I'm getting the following error(and more of the same) in my
> prestats analysis w fsl 4.0. I
> converted all data to NIFTI.GZ format. Seems like something is
> garbled though. Can someone
> help me decipher this?
> Thanks
>
> Network/Servers/.../bin/fsl/bin/fslroi /.../net_study/s1_1st/raw/
> net1 example_func 50 1
> ** WARNING: posn not header size (0, 348)
> ** WARNING: posn not header size (0, 348)
>
> log info:
> ** WARNING: posn not header size (0, 348)
> 3.1250000000
> ** WARNING: posn not header size (0, 348)
> while executing
> "exec sh -c "$FSLDIR/bin/fslval $thefile pixdim1" "
> (procedure "feat5:updateimageinfo" line 19)
> invoked from within
> "feat5:updateimageinfo $w $i 1"
> (procedure "feat5:multiple_check" line 43)
> invoked from within
> "feat5:multiple_check .r 0 1 1 d"
> invoked from within
> ".dialog1.cancel invoke"
> ("uplevel" body line 1)
> invoked from within
> "uplevel #0 [list $w invoke]"
> (procedure "tk::ButtonUp" line 22)
> invoked from within
> "tk::ButtonUp .dialog1.cancel"
> (command bound to event)
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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