Hello,
I have just got to my first diffusion data analysis, after
(hopefully correct ;-) ) creation of bvec and bvals, I ran
eddy_correct, extracted B0 image using fslsplit (OK, it CAN be done
better ;) ), beted the image and I was looking forward to dtifit
output.
After running:
dtifit -k br-corrected.nii.gz -o dti -m nodif_brain_mask -r bvecs -b bvals -V
following output appeared:
----------------------------------
data file br-corrected.nii.gz
mask file nodif_brain_mask
bvecs bvecs
bvals bvals
reading data
reading mask
ok
0 192 0 192 0 70
setting up vols
copying input properties to output volumes
zeroing output volumes
ok
Forming A matrix
starting the fits
0 slices processed
1 slices processed
2 slices processed
3 slices processed
4 slices processed
5 slices processed
6 slices processed
7 slices processed
8 slices processed
9 slices processed
10 slices processed
terminate called after throwing an instance of
'NEWMAT::IncompatibleDimensionsException'
Aborted
--------------------
Any idea what went wrong ?
With thanks
George
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