can you run bedpostx_datacheck on the directory?
Cheers
T
On 11 Oct 2007, at 20:38, Jiří Keller wrote:
> Hello,
> I have just got to my first diffusion data analysis, after
> (hopefully correct ;-) ) creation of bvec and bvals, I ran
> eddy_correct, extracted B0 image using fslsplit (OK, it CAN be done
> better ;) ), beted the image and I was looking forward to dtifit
> output.
> After running:
>
> dtifit -k br-corrected.nii.gz -o dti -m nodif_brain_mask -r bvecs -
> b bvals -V
>
> following output appeared:
> ----------------------------------
>
> data file br-corrected.nii.gz
> mask file nodif_brain_mask
> bvecs bvecs
> bvals bvals
> reading data
> reading mask
> ok
> 0 192 0 192 0 70
> setting up vols
> copying input properties to output volumes
> zeroing output volumes
> ok
> Forming A matrix
> starting the fits
> 0 slices processed
> 1 slices processed
> 2 slices processed
> 3 slices processed
> 4 slices processed
> 5 slices processed
> 6 slices processed
> 7 slices processed
> 8 slices processed
> 9 slices processed
> 10 slices processed
> terminate called after throwing an instance of
> 'NEWMAT::IncompatibleDimensionsException'
> Aborted
> --------------------
> Any idea what went wrong ?
>
> With thanks
> George
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