Hi Lokke,
I think that FAST can not be parallelized (as simply) as other FSL tools.
Segmentation is performed on the whole image at once and not slice by slice.
So I assume that the FSL guys didn't configure it for execution on the
cluster, as it would not give us the results faster anyway.
Martin
On Friday 12 October 2007 19:14:31 Lokke Highstein wrote:
> hello list,
>
> i'm sure you are all sick of my constant posts about the xserve
> cluster, but i have another question.
>
> we are successfully getting FEAT, bedpost, and probtrack jobs to run
> through the SGE, and get distributed across the cluster, but when we
> run FAST, it doesn't get submitted to the queue, and only runs on the
> head node.
>
> i tried reading the fast.tcl file and searching for the terms long.q
> all.q fsl_sub and SGE, didn't find any of them there.
>
> is there something i need to edit to make FAST jobs get submitted to
> my SGE queue?
>
> thanks,
>
> lokke
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