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FSL  September 2007

FSL September 2007

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Subject:

Re: dual versus quad processors

From:

vincent ferrera <[log in to unmask]>

Reply-To:

FSL - FMRIB's Software Library <[log in to unmask]>

Date:

Sat, 8 Sep 2007 12:50:44 -0400

Content-Type:

text/plain

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text/plain (79 lines)

Actually, there is no ideal operating system.  Windows is a pig, but  
has the advantage that it will run on almost any hardware, and is cheap  
and easy to install.

Just about any flavor of linux will have *some* hardware issues unless  
you buy the OS and hardware as a package.  OS X only runs on Apple  
hardware, as far as I know, for which you pay a HUGE premium in cost.   
$2500 for a core2duo when you can get the same hardware from HP or Dell  
for <$1000, and that's the high end of the PC world.

I put together a bare-bones core2quad system with an Intel DP35DP  
motherboard for about $800.  I installed Ubuntu 7.0.4 64-bit version.   
It was not able to recognize the gigabit ethernet on the motherboard,  
so had to install an old 3Com 10/100 PCI ethernet card.  Ubuntu also  
will not recognize a SATA drive (at least not on this motherboard),  
only ATA.

Linux also has a steep learning curve.  Ubuntu was very easy to  
install, but when you run into problems, which you certainly will, you  
are catapulted into a netherworld of geeks who speak NHL (no human  
language), which has a different dialect for each of the 10^100 flavors  
of linux.

On the plus side, Michael Hanke's FSL distro for Debian/Ubunta (see  
what I mean about the geek talk?) was trivially easy to install and  
upgrade, and has worked flawlessly (well, one small glitch, which he  
fixed within a few hours).

The optimal solution may be when OS X runs on generic hardware,  
although I suspect that if this ever happens, it will experience all of  
the same compatibility issues you get for free with Linux.

If you do choose Linux, I would recommend buying it pre-installed on a  
new computer.  More expensive that DIY, less expensive than Apple.


On Sep 8, 2007, at 12:06 PM, Steve Smith wrote:

> Hi - I agree with the other replies that you've had - I would just add  
> that if your intention is to buy a nice new top-spec computer to get  
> improved performance then PLEASE don't then put Windows on it!!  Linux  
> is pretty easy to install and administer these days, and MacOSX  
> (Apple) is even easier - so I would very strongly recommend either of  
> those options instead of Windows.
>
> Cheers, Steve.
>
>
>
>
> On 7 Sep 2007, at 15:51, Emily Rubin Ferreira wrote:
>
>> Dear FSL,
>> We are using your fabulous software for DTI analysis (FDT), and it is  
>> really wonderful but takes quite a while, especially bedpost. So we  
>> are planning to get a new PC that will be a faster system. We are  
>> wondering:
>>
>> Is FSL (specifically FDT and bedpost) optimized for 2 Quad-core  
>> processors (xeon  x5355 2.66Ghz L2 Cache 1333MHz)?
>> Or, are we better off with multiple Dual-core processors? The website  
>> does say under Windows system requirements that FSL recommends Dual  
>> core CPU/multple CPU.
>>
>> Thank you,
>> emily
>
>
> ----------------------------------------------------------------------- 
> ----
> Stephen M. Smith, Professor of Biomedical Engineering
> Associate Director,  Oxford University FMRIB Centre
>
> FMRIB, JR Hospital, Headington, Oxford  OX3 9DU, UK
> +44 (0) 1865 222726  (fax 222717)
> [log in to unmask]    http://www.fmrib.ox.ac.uk/~steve
> ----------------------------------------------------------------------- 
> ----

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