Hi - FSLView only does voxelwise thresholding by virtue of the Min
intensity display range. If you want to do any other thresholding (eg
cluster-based) you'll need to do that outside of FSLView (e.g. with
the "cluster" program).
Cheers.
On 10 Sep 2007, at 09:04, Juergen Haenggi wrote:
> Dear FSL users
>
> We are trying to produce some statistical parametric maps using FSL
> view,
> but we missed the option "cluster extent thresholding" in order to
> exclude
> small clusters. Any idea is appreciated.
>
> Thanks in advance
> Best regards
> Juergen
>
> -----------------------------------------------------------
> Juergen Haenggi
> Ph.D. (Dr. des.)
> Division of Neuropsychology
> Institute of Psychology
> University of Zurich
> Binzmuehlestrasse 14, PO Box 25
> 8050 Zurich, Switzerland
> 0041 44 635 73 97 (phone office)
> 0041 76 445 86 84 (phone mobile)
> 0041 44 635 74 09 (fax office)
> BIN 4.D.04 (office room number)
> [log in to unmask] (email)
> http://www.psychologie.uzh.ch/neuropsy/ (website)
> http://www.juergenhaenggi.ch (private website)
> -----------------------------------------------------------
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
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