Hi,
It's not clear what's going wrong here - the first thing to check is
whether the linear.dof and nonlinear.dof files appear to have been
generated correctly. However, you might like to wait for the new
release which has slightly different registration - registration in
TBSS directly to a new FA template space.
Cheers, Steve.
On 6 Aug 2007, at 14:20, Suzanna Laycock wrote:
> Hi,
>
> A while ago I reported a problems to the list whilst running
> tbss_2, it didn't generate all the .msf files (no.011305), and I
> coudln't resolve it so I reinstalled FSL. Unfortunately the same
> thing has happened again, and tbss_3 won't generate the best
> target. Since reinstalling FSL I have successfully fun the whole
> tbss procedure on a sample size of 3x3.
>
> My current study has 9x9 subjects. I've followed Steve's original
> advice and have deleted the .msf files with 0Kb and rerun tbss_2,
> but it still hasn't worked. Unlike last time, I didn't notice any
> error messages related to the registration.
>
> It's taken 10 days to run tbss_2....so any suggestions how to
> overcome this without re-running the whole thing would be
> gratefullt appreciated?
>
> Best wishes
> Suzanna
------------------------------------------------------------------------
---
Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
------------------------------------------------------------------------
---
|