One more thing,
But I got data.nii file from eddy_correct command. Even if it is not
correct, I still need binary brain mask from bet in order to run DTIFit. But
this does not go.
Aga
On 12.06.2007 17:23 Uhr, "Matt" <[log in to unmask]> wrote:
> Hi,
>
> Delete either the .nii or the .hdr & .img as these are the multiple files
> (you only need one of the two).
>
> Peace,
>
> Matt.
>
> -----Original Message-----
> From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
> Of Aga Burzynska
> Sent: Tuesday, June 12, 2007 11:11 AM
> To: [log in to unmask]
> Subject: [FSL] Multiple files
>
> Dear all,
> Please forgive me such basic question, but I am just starting my work with
> FSL and FDT.
>
> After MRIconvert (dicoms to FSL nifti 4D) of my DW raw data, I got .nii,
> .img .hdr, bvecs and bvals, as expected. However, whatever I try to do with
> FSL, I get the warning: Multiple image files detected. Is there anything
> wrong with my DISH organization?
>
> I guess to get nodif_brain_mask I need to run BET...but this also complains.
>
> If you have any sources that would help me to solve such simple problems
> without asking you, I will be very grateful.
>
> I will be grateful for any advice,
>
> Aga (PhD candidate)
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