It sounds like a single slice has crashed and not finished.
Could you look in the slice directories to see which one has crashed
(the outputs will not be in the directory), and see if there is
anything different about the data from that slice. if not, can you
send us that slice (data_slice_blah and nodif_brain_mask_slice...)
and the bvecs and bvals by uploading them to
http://www.fmrib.ox.ac.uk/cgi-bin/upload.cgi
and telling us the number.
I will take a look as soon as I can, but I'm afraid I am flying to
HBM very soon, so I cannot guarantee to do it before getting back.
T
On 6 Jun 2007, at 23:40, Marc Dubin wrote:
> Hello,
>
> When I run bedpost on my macbook pro intel core 2 duo 2.16 Ghz,
> on my 30 slice data with 26 diffusion directions, it appears to finish
> in about 2 hours (appears that all outpt is there in the directory
> structure)
> and then enter an infinite loop, printing to screen "29 slices
> process" about
> every half hour. Does anyone know if it's done or still doing
> something important?
>
> Best,
> Marc
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