Dear all,
After running DTIFit, when I overlay FA maps and V1 I see in all subejcts
but one the correct color-coding of diffusion direction. It seems that
something happend already before data conversion. I treid avwswapdim, but so
far was unscuccessful.
Can anyone tell me how could this happen with just one scan and what to do?
Best wishes,
Aga
On 20.06.2007 15:24 Uhr, "Steve Smith" <[log in to unmask]> wrote:
> Hi,
>
> Sure - just type "cluster" to get the usage, and output the cluster
> size image for use in the thresholding. Then you can use avwmaths++
> and avwstats++ to get further stats using these masks.
>
> Cheers, Steve.
>
>
> On 19 Jun 2007, at 17:54, Ping-Hong Yeh wrote:
>
>> Dear FSLers,
>>
>> Is there a way to use cluster command on randomise t-maps for
>> thresholding
>> the minimum cluster size, and then output the mean and standard
>> deviation
>> of each subject and individual group for each cluster?
>>
>> Thanks.
>>
>> Ping-Hong Yeh
>
>
> ------------------------------------------------------------------------
> ---
> Stephen M. Smith, Professor of Biomedical Engineering
> Associate Director, Oxford University FMRIB Centre
>
> FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 222726 (fax 222717)
> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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