Hi,
Sure - just type "cluster" to get the usage, and output the cluster
size image for use in the thresholding. Then you can use avwmaths++
and avwstats++ to get further stats using these masks.
Cheers, Steve.
On 19 Jun 2007, at 17:54, Ping-Hong Yeh wrote:
> Dear FSLers,
>
> Is there a way to use cluster command on randomise t-maps for
> thresholding
> the minimum cluster size, and then output the mean and standard
> deviation
> of each subject and individual group for each cluster?
>
> Thanks.
>
> Ping-Hong Yeh
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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