Hello,
Aside from the underlying Cyana issues, you seem also to have a mixed-up
code base as well, since some of your code is coming from:
/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0
and some from:
/data/prog/ccpnmr/ccpnmr1.0
and it should all be the latter (I would have thought). We've seen this
kind of "mixed" code before and it is not good (things are almost bound to
break). Are you running Analysis via /data/prog/ccpnmr/bin/analysis?
And what does that script say? (It should be running code from the second
directory above, not the first one.)
Wayne
On Fri, 1 Jun 2007, Ben Goult wrote:
> Hi Wim
>
> I am having some trouble imported my shift list from a Cyana run, I did it
> in the same way I have with success in the past but I got the following error.
>
>
> Error: Can't handle resonance name 'None'... ignored
>
> ##########################
> # Running linkResonances #
> ##########################
>
>
> NamingSys CYANA2.1 selected
> Warning: set namingSystem for nameMapping from 'Unknown' to CYANA2.1.
> Copying information from [' .-1.CB'] to existing single resonance...
> Copying applicationData...
> Copying resonanceGroup...
> Copying shifts...
> Deleting resonance [' .-1.CB']...
> Warning: Quick shift index value failure
> Exception in Tkinter callback
> Traceback (most recent call last):
> File "/usr/lib64/python2.4/lib-tk/Tkinter.py", line 1345, in __call__
> return self.func(*args)
> File "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
> mat/gui/ImportExportFormatPopup.py", line 864, in ok
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/gui/ImportExportFormatPopup.py", line 886, in apply
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/gui/FormatConverter.py", line 910, in linkResonances
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/general/MultiDialog.py", line 557, in LinkResonancesSetup
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/process/linkResonances.py", line 405, in __init__
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/process/linkResonances.py", line 737, in run
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/process/linkResonances.py", line 3106, in linkResonancesToAtoms
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/process/linkResonances.py", line 3343, in linkToExistingResonances
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/ccpnmr/for
>
> mat/process/linkResonances.py", line 3793, in deleteResonance
> File
> "/data/prog/ccpnmr/temporaryReleaseDir/ccpnmr/ccpnmr1.0/python/memops/api
> /Implementation.py", line
> 309, in delete
> File
> "/data/prog/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/AssignmentBasic.py",
> line 1727, in setQuickShiftList
> raise Exception()
> Exception
> >>>
>
> I am going to try and import data into another project to see if its project
> specific but I wondered if the traceback gave any indication of what may be
> the cause of it failing?
>
> Cheers
>
> Ben
>
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