Hi Lisa,
Does Matthew Brett's slice_overlay program meet your needs?
http://imaging.mrc-cbu.cam.ac.uk/imaging/DisplaySlices
If not, you might be able to tweak it a little using the tips here
(I've not had time to read these properly myself, but just stumbled
across them on Google trying to find the above link)
http://www.nmr.mgh.harvard.edu/~raj/overlaying_Tmaps_tutorial.m
Best,
Ged
Lisa Botes wrote:
> Hi.
>
> I am new to this list and SPM and wonder if someone has any idea how to
> solve my problem.
> I have an image (in analyze format, .hdr and .img) that I would like to
> overlay slices on the T1.mnc. Do I need to create a SPM.mat file in order to
> do that?
> I would also like to create a color bar, like the one you see when
> overlaying the T-map, but for my numbers. Is this possible, and what script
> need to be modified in that case? I am using SPM2.
> Thank you for the help.
>
> Best regards,
> Lisa Botes
> Huddinge University hospital, Stockholm
>
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