Hi,
I am trying to run tbss_2_reg but receive an error when it tries to do
the dof2gipl command:
itkTransformation::New: Unknown file format
Because it doesn't write a file it then gives me an error on the rest
of this part of the script that estimates the mean deformation and
therefore the nonlinear.msf file contains 0 bytes
Any suggestions? I tried to search the list serve and it doesn't seem
like anyone else has had this issue...
Thanks so much for your help in advance,
Kelly Brown
UCHSC Altitude Research Center
Denver, CO USA
** ERROR: nifti_image_read(grotNx.hdr): can't open header file
** ERROR: nifti_image_open(grotNx.hdr): bad header info
Error: failed to open file grotNx.hdr
Error:: FslGetIntensityScaling: Null pointer passed for FSLIO
** ERROR: nifti_image_read(grotNy.hdr): can't open header file
** ERROR: nifti_image_open(grotNy.hdr): bad header info
Error: failed to open file grotNy.hdr
Error:: FslGetIntensityScaling: Null pointer passed for FSLIO
** ERROR: nifti_image_read(grotNz.hdr): can't open header file
** ERROR: nifti_image_open(grotNz.hdr): bad header info
Error: failed to open file grotNz.hdr
Error:: FslGetIntensityScaling: Null pointer passed for FSLIO
** ERROR: nifti_image_read(grotSx): can't open header file
** ERROR: nifti_image_open(grotSx): bad header info
Error: failed to open file grotSx
Error:: FslGetIntensityScaling: Null pointer passed for FSLIO
** ERROR: nifti_image_read(grotSS): can't open header file
** ERROR: nifti_image_open(grotSS): bad header info
Error: failed to open file grotSS
ERROR: Could not open image grotSS
Image Exception : #22 :: Failed to read volume grotSS
terminate called after throwing an instance of 'RBD_COMMON::Exception'
/usr/local/fsl/bin/tbss_reg: line 50: 4069 Aborted
$FSLDIR/bin/avwstats++ grotSS -M -P 50 >../${I2R}_nonlinear.msf
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