Hi,
During bedpost, error messages appeared (Mac intel).
Errors:
/usr/local/fsl/bin/bedpost_proc:
line96: 7274 Segmentation fault
nice ${FSLDIR}/bin/diff_pvm
--data=${subjdir}/dataclice_$slicezp
--mask=${subjdir}/nodif_brain_maskslice_$slicezp -b ${subjdir}/bvals -r ${subjdir}/bvecs
--logdir=${subjdir}.bedpost/diff__slices/data_slice_$slicezp
--nj=1300 --bi=300 --se=20
>${subjdir}.bedpost/ogs/log$slicezp
-------
Displayed things on terminal
-----------
>fsl &
processing vol0000.nii.gz
Done!
rm -rf /Users/Documents/DTI/TBSS/fdt/c003.bedpost
bedpost /Users/Documents/DTI/TBSS/fdt/c003
/usr/local/fsl/bin/bedpost /Users/Documents/EMMA/DTI/TBSS/fdt/c003
subjectdir is /Users/Documents/DTI/TBSS/fdt/c003
making bedpost directory
copying files to bedpost directory
processing data on local host
/Users/Documents/DTI/TBSS/fdt/c003> Merging outputs into 4D files
Usage: avwmerge <-x/y/z/t> <output> <file1 file2 .......>
-t : concatenate images in time
-x : concatenate images in the x direction
-y : concatenate images in the y direction
-z : concatenate images in the z direction
-a : auto-choose: single slices -> volume, volumes -> 4D (time series)
Usage: avwmerge <-x/y/z/t> <output> <file1 file2 .......>
-t : concatenate images in time
-x : concatenate images in the x direction
-y : concatenate images in the y direction
-z : concatenate images in the z direction
-a : auto-choose: single slices -> volume, volumes -> 4D (time series)
Usage: avwmerge <-x/y/z/t> <output> <file1 file2 .......>
-t : concatenate images in time
-x : concatenate images in the x direction
-y : concatenate images in the y direction
-z : concatenate images in the z direction
-a : auto-choose: single slices -> volume, volumes -> 4D (time series)
DONE
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