Again something like this has occurred: I reopened a relatively new
project, which was working fine a few minutes earlier, and now Analysis
is getting confused again. Any assignments I make are not showing up in
the spectra/windows*. Also, the program does not seem to update the
assignment panel(s) properly: when I assigned a peak with a newly
generated resonance, that value normally shows up among the 'assignment
possibilities'. However, this is currently not happening. (I checked for
it in the list of resonances for the project, and these new resonances
are properly listed.)
* one note: the assignments do show up when I doubleclick the already
indicated assignment in the assignment panel and then re-assign the
specific atom in the resulting atom browser popup
The only sign of trouble I see, is the following deprecation warning:
successfully saved project
Deprecated: getByKey called with too short key
from doLoad line 770 in
/home/pca/research/software/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlIO.py:
[" obj = oo.getByKey(endMap['class'],useKey)\n"]
start generating ccpnmr.Analysis output
start generating ccp.general.Method output
start generating ccp.nmr.Nmr output
start generating memops.Implementation output
successfully saved project
Deprecated: getByKey called with too short key
from doLoad line 770 in
/home/pca/research/software/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlIO.py:
[" obj = oo.getByKey(endMap['class'],useKey)\n"]
Patrick
Patrick van der Wel wrote:
> Roberto Kopke Salinas wrote:
>
>> Thanks.
>> Yes the peaks were within the assignment tolerances. It looks like a bit a
>> silly, but i just quitted and re-started the program and now the program it
>> is drawing the assignments on the spectrum!!
>>
>>
> I had something similar happen a few days ago, when I started a new
> project using an import Xeasy shift table and Xeasy structure file
> (which I had both exported from a previous analysis project). I was able
> to assign the peaks from the custom shift list, but it was refusing to
> display them on the spectrum (only showing the dashes instead) until I
> went in and manually re-assigned each relative to the sequence. But
> after a certain time (including a restart, I think) things did start to
> work normally.
>
> Patrick
>
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