Hi -
b.t.w, you will have to change your bvecs file, as they are not in the
correct orientation. This file works better: www.fmrib.ox.ac.uk/~saad/bvecs
I did the following transform:
x->z
y->-y
z->x
It looks alright on the coronal view, but it's hard to say on the others as
the resolution is very poor.
cheers,
saad
On Thu, 25 Jan 2007 16:01:28 +0000, Swati Rane <[log in to unmask]> wrote:
>Dear Sir,
>
>I ran the '3dTO4d' script and the followed by 'avwroi' and 'bet' scripts and
>modified the bvals file. The program still terminates when I run the
>following script:
>
>dtifit -k data -m nodif_brain_mask -r bvecs -b bvals -o dti
>
>My upload ID is 643739. COuld you please tell me what is wrong now?
>
>Thanks!
>
>Swati
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