hi Mark:
I use the command "pico" to edit .bash_profile. Then I deleted everything. Then I type the script from scratch. The thing I typed in the file was :
FSLDIR=/Users/xuelin/fsl/fsl
. ${FSLDIR}/etc/fslconf/fsl.sh
PATH=${FSLDIR}/bin:${PATH}
export FSLDIR PATH
export DISPLAY=localhost:0.0
where "/Users/xuelin/fsl/" is my path where I extracted the FSL package. I dont know what is plain text mode. And I didnt see the menu that I can select the plain test mode. I am not sure whether my mode was plain text mode when I was editing this script. :(
Xuelin
****************************************
Xuelin Cui
Department of Electrical Engineering
University of Hawaii-Manoa
Honolulu HI 96822
Tel: 1-808-349-0983
Email: [log in to unmask]
****************************************
----- Original Message -----
From: Mark Jenkinson <[log in to unmask]>
Date: Monday, January 15, 2007 10:58 pm
Subject: Re: [FSL] installing FSl3.3.8 on a Mac
To: [log in to unmask]
> Hi,
>
> How did you put the commands in your .bash_profile originally?
> If it isn't a pure text file then that would explain why things
> are not working. Never use Word for things like this as it
> corrupts the files badly. Ideally use a plain text editor
> (e.g. pico), or even TextEdit *if* you force it to work in
> plain text mode.
>
> This sounds like the most likely problem at the moment.
> So load up your existing .bash_profile in a text editor, delete
> the lines you added before and cut and paste the lines again
> from our docs. Then you can edit the FSLDIR path (still in
> the text editor) and hopefully everything will work after that.
>
> All the best,
> Mark
>
>
> On Mon, 15 Jan 2007 14:41:33 -1000, Xuelin Cui <[log in to unmask]>
> wrote:
> >hi Mark
> >
> >Many thanks for answering my questions.
> >
> >I tried logging in/out, but it doesn't work. I type the command
> bash in my
> console, there are "GNU bash, version 2.05b.0(1)-release
> (powerpc-apple-darwin8.0)" info like that, followed by the command
> list. So
> I think it is bash, isn't it? I don't know how to put command in my
> .bash_profile. I am new to this. For the script in the
> .bash_profile, I
> simply copy everything from the website and paste it in to the
> file. The
> only thing I changed was the directory. I used my own.
> >
> >So I don't really what else can I try. Do you have any suggestion?
> >
> >Thanks a lot, I appreciate your help
> >
> >Xuelin
> >
> >
> >
> >****************************************
> >Xuelin Cui
> >Department of Electrical Engineering
> >University of Hawaii-Manoa
> >Honolulu HI 96822
> >
> >Tel: 1-808-349-0983
> >Email: [log in to unmask]
> >****************************************
> >
> >----- Original Message -----
> >From: Mark Jenkinson <[log in to unmask]>
> >Date: Sunday, January 14, 2007 10:58 pm
> >Subject: Re: [FSL] installing FSl3.3.8 on a Mac
> >To: [log in to unmask]
> >
> >> Hi,
> >>
> >> Putting fsl in your own path should be fine.
> >> It looks like your environment setup isn't right.
> >>
> >> Did you try logging out and logging in again?
> >> Sometimes logging out/in is the easiest way to force
> >> everything to start afresh and see if it works.
> >>
> >> Are you sure you are running bash?
> >> It is possible to set up the user shell to run tcsh instead,
> >> and this would stop the .bash_profile from being run.
> >>
> >> If none of this is the case, then try putting the commands
> >> in your .profile instead.
> >>
> >> If even this fails then try remaking the file from the
> >> website instructions (cut and paste rather than type
> >> the commands so that all the syntax is exact).
> >>
> >> Hopefully something here will work.
> >> Otherwise email us again.
> >> All the best,
> >> Mark
> >>
> >>
> >> On 12 Jan 2007, at 03:06, Xuelin Cui wrote:
> >>
> >> > hi all:
> >> >
> >> > I am new to fsl. I had a problem when I was installing the fsl on
> >>
> >> > my Mac. I
> >> > follow the instruction every step. The only difference is that I
> >> un-
> >> > tar the
> >> > download package to my own path: /Users/xuelin/. After un-tar,
> >> all
> >> > the fsl
> >> > files and folder were in the folder of /User/xuelin/fsl.
> >> >
> >> > Then I modified the .bash_profile as the instruction said. I
> copied>> > everything but change the first line into:
> FSLDIR=/Users/xuelin/>> > fsl. Then I
> >> > exit te termical and re-launch it again. But when I am trying to
> >> > see if I
> >> > correctly setup the environment by typing "echo $FSLDIR", it
> >> shows
> >> > nothing
> >> > on the screen. Then of course I failed to run fsl, as well as its
> >> GUI.>
> >> > I dont know why I failed like that? Is that because I didnt
> >> > correctly setup
> >> > my envioronment?
> >> >
> >> > Anyone can help, I really appreciate.
> >> >
> >> > Thanks
> >> >
> >> > Xuelin
> >>
> >=========================================================================
>
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