It is now a different error message but probably still related to
objects in my T1/T2 time series experiments.
Traceback as follows:
last xml element read:
</_StorageUnit>
parser state was:
checking object validity
ERROR loading xml ccp.Nmr ccp/Nmr.xml
Traceback (most recent call last):
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analys isGui.py", line 169, in ?
main(filename, max_size, glDirect)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analys isGui.py", line 102, in main
top.initProject(project)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analys isPopup.py", line 904, in initProject
Analysis.initProject(self, project)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analys is.py", line 206, in initProject
self.initResonances()
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analys is.py", line 1059, in initResonances
resonances = self.project.resonances
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/memops/api/Implementat ion.py", line 17466, in getResonances
otherStorage.load()
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/memops/api/Implementat ion.py", line 8904, in load
ioModule.load(stream, self.project)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/ccp/xml/Nmr.py", line
113, in load
return GeneralXmlIO.load(stream, mapping, parentObject)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlI O.py", line 370, in load
result = doLoad(stream, mapping, headObject)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/memops/format/xml/XmlI O.py", line 567, in doLoad
headObject.checkAllValid(checkPackage=packageName)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/memops/api/Implementat ion.py", line 25367, in checkAllValid
value.checkAllValid(complete)
File
"/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/ccp/api/Nmr.py", line
97443, in checkAllValid
raise ApiError("%s.checkAllValid: sampleConditions:" %
self.qualifiedName +
memops.general.Implementation.ApiError:
ccp.Nmr.SampleConditionSet.checkAllValid : sampleConditions:non-unique
key:Time
On Tue, 2006-04-11 at 18:18 +0100, Tim Stevens wrote:
> > "/usr/people/henryh/source/ccpnmr/ccpnmr1.0/python/memops/format/xml/Compatibility.py", line 1569, in conv_ccp_Nmr_1_0_212
> > for xsc in nxs.expSeriesConditions:
> > AttributeError: 'NmrExpSeries' object has no attribute
> > 'expSeriesConditions'
>
> This was a problem in backward compatibility code for an object class that
> no longer exists in the data model.
>
> Rasmus has provided a fix and I have uploaded it to the Upgrade server.
>
> Patch and restart and hopefully everything will load...
>
> T.
>
> -------------------------------------------------------------------------------
> Dr Tim Stevens Email: [log in to unmask]
> Department of Biochemistry [log in to unmask]
> University of Cambridge Phone: +44 1223 766022 (office)
> 80 Tennis Court Road +44 7816 338275 (mobile)
> Old Addenbrooke's Site +44 1223 364613 (home)
> Cambridge CB2 1GA WWWeb: http://www.bio.cam.ac.uk/~tjs23
> United Kingdom http://www.pantonia.co.uk
> -------------------------------------------------------------------------------
> ------ +NH3CH(CH(CH3)OH)C(O)NHCH(CH(CH3)CH2CH3)C(O)NHCH(CH2CH2SCH3)CO2- -------
> -------------------------------------------------------------------------------
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