Wim Vranken schrieb:
> Hi Christoph,
>
> What you describe should work - best to do this on the formatConverter
> level though (otherwise the process will be very slow), and make sure you
> run linkResonances after doing your import.
>
I do. At this stage this seems to work fine
> One other problem with Cyana/XEasy peak/shift lists is that the peak lists
> are assigned to 'atom serials' that you have to get from the shift list,
> so you cannot get the assignment for peaks unless you get the 'atom
> serial' information from the shift list.
>
I know. The resolution of resonance (or atom) - numbers is provided by
the Xeasy .prot-file that I also import. Analysis generates a new
resonance list from this file. However, it seems that if there is
another resonance list present in the project the linking seems to fail.
At least thats what I decipher from the "text-output" that happens when
I try to export that list again. Then I get things like
Warning: No resonanceSet for resonance with name ' .74.HB2' (xeasy
names) - ignored
Can't handle resonance ' .74.HB2' (xeasy names)
If there is nothing in the project but the sequence, everything works fine.
> If it still doesn't work, send me a .tgz of your project and a set of the
> files you're trying to import and I'll have a look at it.
>
> Also, if you're going to do this very often, it might be worth writing a
> custom-written script to automate the whole process - I can help you with
> that.
>
> Wim
>
>
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Christoph Brockmann
Forschungsinstitut fuer Molekulare Pharmakologie (FMP)
Robert Roessle Str. 10
D-13125 BERLIN, Germany
phone: +49-30-94793-223
email: [log in to unmask]
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