Dear Neil, List,
> 2. It is not clear to me yet (I have evidence both ways) if SPM2 can be
> operated correctly with MATLAB7 (which does run and is supported
on 2.6 kernels)
SPM2 runs smooth on two linux boxes here (Fedora core 2 on 2 64-bit
Opterons, Debian on 2 Xeons, all 2.6.x kernels) on matlab7. For 64 bit
we had to recompile the binaries. I heard many similar reports on this
email list, try a search on 'spm2 matlab7'.
Good luck,
Bas
Neil Killeen wrote:
> Sterling
>
> On 25/10/2006, at 10:50 AM, Sterling Johnson wrote:
>
>> you can always continue using matlab6.5. Your new license for matlab 7
>> is backward compatible.
>> scj
>>
>
> yes I realise that and we do that. The issue is that
>
>
> 1. MATLAB6.5 and SPM2 crash on Linux 2.6 kernels (MATLAB 6.5 is not
> officially supported on Linux 2.6 kernels)
> at our Lab (binary distribution - we will try to rebuild the
> compiled code but the problems
> appear to be in GUI-related stuff)
> 2. It is not clear to me yet (I have evidence both ways) if SPM2 can be
> operated correctly with MATLAB7 (which does run and is supported
> on 2.6 kernels)
> 3.Our hosts are evolving to 2.6 kernels as machines are updated.
> 4. Users who have started analysis with SPM2 prefer to stick with
> SPM2 for that project
>
>
> If SPM2/MATLAB is a good combination, this resolves our problem.
>
> regards
> Neil
>
>
>>
>>
>>>>> Neil Killeen <[log in to unmask]> 10/24/06 7:21 PM >>>
>>>>
>> John
>>
>> On 24/10/2006, at 7:08 PM, Ashburner John (PSYCHOLOGY) wrote:
>>
>>> The most authoritative source of such information is on the
>>
>> MathWorks
>>
>>> web site:
>>
>> http://www.mathworks.com/products/matlab/requirements.html
>>
>>>
>>> Here, it will tell you which versions of Linux are compatible with
>>
>> the
>>
>>> different versions of MATLAB. For example, it mentions no support
>>
>> for
>>
>>> Linux 2.6.x with MATLAB R13.
>>>
>>> Best regards,
>>> -John
>>
>>
>> yes I had seen that and the absence of 2.6 kernels listed for MATLAB6
>> It may be a real problem if we can't operate spm2 with matlab7 (users
>> who have started their processing with spm2 want to to stick with it)
>>
>> However, it seems to me that many people would face this issue
>> unless they can evolve away to SPM5 or if SPM2 works with ML7
>> (which is what I hope is the ultimate solution).
>>
>>
>> regards
>> Neil
>>
>>
>>>
>>> -----Original Message-----
>>> From: SPM (Statistical Parametric Mapping)
>>
>> [mailto:[log in to unmask]]
>>
>>> On Behalf Of Neil Killeen
>>> Sent: Tuesday, October 24, 2006 2:31 AM
>>> To: [log in to unmask]
>>> Subject: [SPM] spm2 with matlab7
>>>
>>> Hi
>>>
>>> we generally operate
>>>
>>> matlab7 + spm5
>>> matlab6 + spm2
>>>
>>> However, matlab6 + spm2 is failing with Linux 2.6 kernels (2.4 ok)
>>> with libc errors. matlab7 seems ok.
>>>
>>> Can someone comment, authoritatively, whether the combination
>>> of matlab7 and spm2 can be operated correctly (some small tests I
>>> have run have been ok) ? I have 'heard' various things, but I
>>> would expect MATLAB to be backwards compatible
>>> and that there should be no problem with this combination
>>>
>>>
>>> thanks
>>> Neil
>>
--
--------------------------------------------------
Dr. S.F.W. Neggers
Division of Brain Research
Rudolf Magnus Institute for Neuroscience Utrecht University Medical Center
Visiting : Heidelberglaan 100, 3584 CX Utrecht
Room A.00.1.24
Mail : Huispost A.01.126, P.O. Box
3508 GA Utrecht, the Netherlands
Tel : +31 (0)30 2503386
Fax : +31 (0)30 2505443
E-mail : [log in to unmask]
Web : http://www.fmri.nl/people/bas.html
--------------------------------------------------
|