Hiya -
If you tar up the input directory and upload it onto the fmrib site,
I will take a look for you.
http://www.fmrib.ox.ac.uk/cgi-bin/upload.cgi
don't forget to send me the ID number when you get it.
T
Tim Behrens
Centre for Functional MRI of the Brain
The John Radcliffe Hospital
Headley Way Oxford OX3 9DU
Oxford University
Work 01865 222782
Mobile 07980 884537
On 16 Jan 2006, at 12:59, Torsten Ruest wrote:
> Dear all,
>
> I want to use fdt to analyze our mouse brain data, however I am
> stuck with
> an orientation problem. The FA map looks just noisy. I converted
> the data
> from Bruker's native paravision format as follows:
> Bruker Paravision --> DICOM (using Paravision software)
> DICOM --> ANALYZE (using SPM5), and then created a 4D image using
> avwmerge
> (fsl).
>
> Here are my diffusion directions:
> Diffusion Directions:
> 0.666667 0.666667 0.333333
> 0.666667 0.666667 -0.333333
> 0.666667 0.333333 0.666667
> 0.666667 -0.333333 0.666667
> 0.333333 0.666667 0.666667
> -0.333333 0.666667 0.666667
>
> What do I need to change in order to make it work properly? How can
> I test
> that all the data is in the right format?
>
> I am somewhat confused by this, and would really appreciate if
> there is
> somebody out there who can help me.
>
> Thanks very much in advance,
>
>
> Torsten
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