Hi there,
I have been working through the FSL Diffusion Imaging tutorial and I come
across the following error after running tbss_3_postreg.
cassini:/usr/share/fsl-feeds/fsl-tutorial/fsl_course_data1/tbss# tbss_3_postreg
finding best target
CON_CE_FAi 11.6794176666 7.3507541666
CON_HJ_FAi 12.5080315000 8.6187358333
CON_ZC_FAi 12.7015718333 8.5917515000
PAT_AB_FAi 14.4689163333 10.2514833333
PAT_BS_FAi 12.1199936666 8.7357570000
PAT_CS_FAi 12.4555933333 9.0304803333
best target is CON_CE_FAi - now registering this to standard space
affine-registering target to MNI152 space
/usr/share/fsl/bin/tbss_3_postreg: line 68: /usr/share/fsl/bin/DR/areg: No
such file or directory
/usr/share/fsl/bin/tbss_3_postreg: line 69:
/usr/share/fsl/bin/DR/transformation: No such file or directory
transforming (and upsampling) all FA images into MNI152 space
CON_CE_FAi
/usr/share/fsl/bin/tbss_3_postreg: line 76:
/usr/share/fsl/bin/DR/transformation2: No such file or directory
CON_HJ_FAi
/usr/share/fsl/bin/tbss_3_postreg: line 76:
/usr/share/fsl/bin/DR/transformation2: No such file or directory
CON_ZC_FAi
/usr/share/fsl/bin/tbss_3_postreg: line 76:
/usr/share/fsl/bin/DR/transformation2: No such file or directory
PAT_AB_FAi
/usr/share/fsl/bin/tbss_3_postreg: line 76:
/usr/share/fsl/bin/DR/transformation2: No such file or directory
PAT_BS_FAi
/usr/share/fsl/bin/tbss_3_postreg: line 76:
/usr/share/fsl/bin/DR/transformation2: No such file or directory
... so then the merging of the images fails because there is nothing to merge.
I have checked the fsl/bin folder, and sure enough, there is no DR
directory, so nothing to execute the transforms of the images to MNI space.
Where is my DR directory? I have not seen this issue addressed in the
archives. Any help will be much appreciated.
Thanks in advance,
Peter
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