Hi
I did the featreapply, but I ended up with an empty stats directory
in the reg_standard directory.
So I looked again at the contrasts, and even though r1 had the
correct contrasts, the next run, r2 had incorrect contrasts (too
many). I'm running the first level for r2 again and hope that will
fix the problem.
thanks for your help!
Teena
>Hi - it should work to just run
>
>featregapply /space/raid/data/holyoak/fsl_analysis/simple_RC/104/r1.feat
>
>though I'm not sure this is your problem - it sounds like maybe the
>problem is that this FEAT directory doesn't have a set of contrasts
>in it that correspond to the contrasts in the other lower-level FEAT
>directories.
>
>Cheers, Steve.
>
>
>On 10 Oct 2006, at 00:44, Teena Moody wrote:
>
>>Hi
>>I am running higher level analysis and have run into the following error.
>>
>>
>>Error - not all input FEAT directories have the same set of contrasts!
>>(currently looking for
>>/space/raid/data/holyoak/fsl_analysis/simple_RC/104/r1.feat/reg_standard/stats/cop
>>
>>The reg_standard doesn't exist in 104/r1.feat directory, but it is in all
>>the other 10*/r*".feats. I saw an earlier post that suggested that the
>>problem was: "not_ turning off the "cleanup first-level standard-space
>>images" button in the Misc tab - hence if you
>> do simultaneous higher-level runs, some might be cleaning up the upsampled
>>first-level images (which are IN the first-level FEATdirs) whilst other
>>runs are running. Hopefully if you turn off that button all will be well.
>>
>>I checked, and the button is off.
>>
>>It is possible that was the button was on in another analysis, but when I
>>reran the higher level analysis -with the button off, I got the same error
>>message. How do I get the reg_standard directory to be created in a single
>>feat for the higher level?
>>
>>Any suggestions would be appreciated!
>>
>>thanks
>>Teena Moody
>
>
>---------------------------------------------------------------------------
>Stephen M. Smith, Professor of Biomedical Engineering
>Associate Director, Oxford University FMRIB Centre
>
>FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
>+44 (0) 1865 222726 (fax 222717)
>[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
>---------------------------------------------------------------------------
--
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Teena D Moody, Ph.D.
Assistant Researcher
UCLA Psychology Dept
lab phone: 310-206-2272
cell phone: 310-503-5630
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