Hi All,
Here spm2 works with linux Matlab 7.2, but not 7.3. This problem may
not occur with spm5.
73, Peter
On 25 Oct 2006, at 10:26, Mark Daglish wrote:
> Hi All,
>
> I can't be "authoritative", but we run spm2 & spm5 on Matlab7 & Matlab
> 2006a on SuSE10.1/Pentium, SuSE10.1/Athlon64 and Solaris9/SPARC.
> As Bas
> said, we had to recompile the spm2 binaries for the Athlon64. I
> haven't
> thoroughly tested all of it, but so far no problems big enough to
> stick
> in my memory.
>
> HTH,
> Mark
>
> Bas Neggers wrote:
>> Dear Neil, List,
>>
>>> 2. It is not clear to me yet (I have evidence both ways) if SPM2
>>> can be
>>> operated correctly with MATLAB7 (which does run and is
>> supported on 2.6 kernels)
>>
>> SPM2 runs smooth on two linux boxes here (Fedora core 2 on 2 64-bit
>> Opterons, Debian on 2 Xeons, all 2.6.x kernels) on matlab7. For 64
>> bit
>> we had to recompile the binaries. I heard many similar reports on
>> this
>> email list, try a search on 'spm2 matlab7'.
>>
>> Good luck,
>>
>> Bas
>>
>> Neil Killeen wrote:
>>
>>> Sterling
>>>
>>> On 25/10/2006, at 10:50 AM, Sterling Johnson wrote:
>>>
>>>> you can always continue using matlab6.5. Your new license for
>>>> matlab 7
>>>> is backward compatible.
>>>> scj
>>>>
>>>
>>> yes I realise that and we do that. The issue is that
>>>
>>>
>>> 1. MATLAB6.5 and SPM2 crash on Linux 2.6 kernels (MATLAB 6.5 is not
>>> officially supported on Linux 2.6 kernels)
>>> at our Lab (binary distribution - we will try to rebuild the
>>> compiled code but the problems
>>> appear to be in GUI-related stuff)
>>> 2. It is not clear to me yet (I have evidence both ways) if SPM2
>>> can be
>>> operated correctly with MATLAB7 (which does run and is
>>> supported on 2.6 kernels)
>>> 3.Our hosts are evolving to 2.6 kernels as machines are updated.
>>> 4. Users who have started analysis with SPM2 prefer to stick with
>>> SPM2 for that project
>>>
>>>
>>> If SPM2/MATLAB is a good combination, this resolves our problem.
>>>
>>> regards
>>> Neil
>>>
>>>
>>>>
>>>>
>>>>>>> Neil Killeen <[log in to unmask]> 10/24/06 7:21 PM >>>
>>>>>>
>>>> John
>>>>
>>>> On 24/10/2006, at 7:08 PM, Ashburner John (PSYCHOLOGY) wrote:
>>>>
>>>>> The most authoritative source of such information is on the
>>>>
>>>> MathWorks
>>>>
>>>>> web site:
>>>>
>>>> http://www.mathworks.com/products/matlab/requirements.html
>>>>
>>>>>
>>>>> Here, it will tell you which versions of Linux are compatible with
>>>>
>>>> the
>>>>
>>>>> different versions of MATLAB. For example, it mentions no support
>>>>
>>>> for
>>>>
>>>>> Linux 2.6.x with MATLAB R13.
>>>>>
>>>>> Best regards,
>>>>> -John
>>>>
>>>>
>>>> yes I had seen that and the absence of 2.6 kernels listed for
>>>> MATLAB6
>>>> It may be a real problem if we can't operate spm2 with matlab7
>>>> (users
>>>> who have started their processing with spm2 want to to stick
>>>> with it)
>>>>
>>>> However, it seems to me that many people would face this issue
>>>> unless they can evolve away to SPM5 or if SPM2 works with ML7
>>>> (which is what I hope is the ultimate solution).
>>>>
>>>>
>>>> regards
>>>> Neil
>>>>
>>>>
>>>>>
>>>>> -----Original Message-----
>>>>> From: SPM (Statistical Parametric Mapping)
>>>>
>>>> [mailto:[log in to unmask]]
>>>>
>>>>> On Behalf Of Neil Killeen
>>>>> Sent: Tuesday, October 24, 2006 2:31 AM
>>>>> To: [log in to unmask]
>>>>> Subject: [SPM] spm2 with matlab7
>>>>>
>>>>> Hi
>>>>>
>>>>> we generally operate
>>>>>
>>>>> matlab7 + spm5
>>>>> matlab6 + spm2
>>>>>
>>>>> However, matlab6 + spm2 is failing with Linux 2.6 kernels (2.4
>>>>> ok)
>>>>> with libc errors. matlab7 seems ok.
>>>>>
>>>>> Can someone comment, authoritatively, whether the combination
>>>>> of matlab7 and spm2 can be operated correctly (some small tests I
>>>>> have run have been ok) ? I have 'heard' various things, but I
>>>>> would expect MATLAB to be backwards compatible
>>>>> and that there should be no problem with this combination
>>>>>
>>>>>
>>>>> thanks
>>>>> Neil
>>>>
>>
>>
@ @
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