I am using spm_segment to do optimized VBM in SPM5 without using the user interface. It outputs
the affine transformation parameters as type <double>, but not the *_seg_sn.mat that the user
interface outputs. Does anyone know if there is a function I could run to get the additional structure
information to turn the affine matrix into the _seg_sn.mat structure? If anyone has done VBM with
SPM5 bypassing the user interface, I would appreciate any sample scripts you may have to offer.
Thanks.
-Lynne
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