There is a new set of fixes and updates (including a new DCM chapter in the
manual) available for SPM5, which will update your version to Revision 573.
These can be downloaded from our ftp server at:
        ftp://ftp.fil.ion.ucl.ac.uk/spm/spm5_updates

I've been asked to release a new batch of updates for SPM5. If you have the
original SPM5 installation (with or without previous updates), then simply
download and install the patches from the Updates_573.tar.gz file and
overwrite the existing files with the new ones. A list of changes is
available in the Updates_README.txt file. A more detailed list can be found
in Updates_Diff.txt. The Updates_Log.xml is an XML file, that may be useful
some time. The actual changes made since Revision 546 (the previous set of
updates) and 573 (this set) are below.

Best regards,
-John


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r547 | john | 2006-06-07 13:23:17 +0100 (Wed, 07 Jun 2006) | 2 lines
Changed paths:
   M /trunk/spm_eeg_inv_BSTfwdsol.m
   M /trunk/spm_eeg_inv_datareg.m
   M /trunk/spm_eeg_inv_datareg_ui.m
   M /trunk/spm_eeg_inv_ecd_fitDip_ui.m
   M /trunk/spm_eeg_inv_elec_Rsph_ui.m
   M /trunk/spm_eeg_inv_evoked.m
   M /trunk/spm_eeg_inv_imag_api.m
   M /trunk/spm_eeg_inv_induced.m
   M /trunk/spm_eeg_inv_mesh_ui.m

* Added Jeremie's updates

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r548 | volkmar | 2006-06-07 13:36:37 +0100 (Wed, 07 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews.m

Fix colorbar appearence and color scaling
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r549 | volkmar | 2006-06-07 13:37:29 +0100 (Wed, 07 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_config_movefile.m

Fix file moving utility to cope better with virtual NIfTI frames
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r550 | volkmar | 2006-06-07 13:38:50 +0100 (Wed, 07 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_dicom_convert.m

Try to get around missing DICOM fields
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r551 | john | 2006-06-07 19:28:02 +0100 (Wed, 07 Jun 2006) | 2 lines
Changed paths:
   A [log in to unmask]
   A /trunk/plgndr.mexmac
   A /trunk/toolbox/HDW/spm_affdef.mexmac
   A /trunk/toolbox/HDW/spm_def2det.mexmac
   A /trunk/toolbox/HDW/spm_warp.mexmac

* Added some mexmac files

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r552 | volkmar | 2006-06-08 07:26:38 +0100 (Thu, 08 Jun 2006) | 1 line
Changed paths:
   A /trunk/fillstruct.m
   M /trunk/treelist.m

fixed checkfields dependency - now called fillstruct.m to avoid name clashes
with spm_dicom_convert
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r553 | volkmar | 2006-06-08 07:29:56 +0100 (Thu, 08 Jun 2006) | 1 line
Changed paths:
   A /trunk/toolbox/HDW/spm_affdef.mexa64
   A /trunk/toolbox/HDW/spm_def2det.mexa64
   A /trunk/toolbox/HDW/spm_warp.mexa64

added mexa64 code for HDW toolbox
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r554 | volkmar | 2006-06-08 13:53:00 +0100 (Thu, 08 Jun 2006) | 1 line
Changed paths:
   A /trunk/spm_dilate_erode.mexa64

added spm_dilate_erode.mexa64
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r555 | james | 2006-06-19 18:23:39 +0100 (Mon, 19 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_eeg_average.m

bug fix
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r556 | volkmar | 2006-06-21 16:02:28 +0100 (Wed, 21 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews/spm_ov_roi.m

Added option to read additional ROIs from images after ROI tool has been
launched
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r557 | volkmar | 2006-06-21 16:10:34 +0100 (Wed, 21 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews/spm_ov_roi.m

Fixed typo
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r558 | volkmar | 2006-06-26 09:40:24 +0100 (Mon, 26 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_config_factorial_design.m

fixed a bug: reorder user specified covariates when reordering
scans/conditions in flexible factorial design
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r559 | volkmar | 2006-06-26 14:47:04 +0100 (Mon, 26 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews/spm_ov_roi.m

changed cluster computation (use spm_bwlabel), add erosion/dilation
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r560 | volkmar | 2006-06-28 12:21:40 +0100 (Wed, 28 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews.m

display frame number(s) in context menu
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r561 | volkmar | 2006-06-29 14:13:09 +0100 (Thu, 29 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews/spm_ov_reorient.m

Fixed bug when applying reorientations
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r562 | volkmar | 2006-06-29 14:16:36 +0100 (Thu, 29 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews/spm_ov_reorient.m

Fix typo
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r563 | volkmar | 2006-06-29 14:21:33 +0100 (Thu, 29 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_orthviews/spm_ov_reorient.m

Fix another typo
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r564 | volkmar | 2006-06-29 16:33:34 +0100 (Thu, 29 Jun 2006) | 1 line
Changed paths:
   M /trunk/spm_dicom_convert.m

Add option to convert into .nii instead of .img+.hdr files
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r565 | will | 2006-06-29 17:03:55 +0100 (Thu, 29 Jun 2006) | 1 line
Changed paths:
   A /trunk/man/dcm
   A /trunk/man/dcm/Fig1.jpg
   A /trunk/man/dcm/Fig2.jpg
   A /trunk/man/dcm/Fig3.jpg
   A /trunk/man/dcm/Fig4.JPG
   A /trunk/man/dcm/Fig5.JPG
   A /trunk/man/dcm/Fig6.JPG
   A /trunk/man/dcm/Fig7.JPG
   A /trunk/man/dcm/Fig8.JPG
   A /trunk/man/dcm/dcm.tex
   A /trunk/man/dcm/dcm_mod_bwd.jpg
   A /trunk/man/dcm/dcm_mod_fwd.jpg
   M /trunk/man/manual.tex

Added DCM chapter to manual
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r566 | john | 2006-07-03 11:04:24 +0100 (Mon, 03 Jul 2006) | 2 lines
Changed paths:
   D /trunk/man/dcm/Fig4.JPG
   A /trunk/man/dcm/Fig4.jpg (from /trunk/man/dcm/Fig4.JPG:565)
   D /trunk/man/dcm/Fig5.JPG
   A /trunk/man/dcm/Fig5.jpg (from /trunk/man/dcm/Fig5.JPG:565)
   D /trunk/man/dcm/Fig6.JPG
   A /trunk/man/dcm/Fig6.jpg (from /trunk/man/dcm/Fig6.JPG:565)
   D /trunk/man/dcm/Fig7.JPG
   A /trunk/man/dcm/Fig7.jpg (from /trunk/man/dcm/Fig7.JPG:565)
   D /trunk/man/dcm/Fig8.JPG
   A /trunk/man/dcm/Fig8.jpg (from /trunk/man/dcm/Fig8.JPG:565)
   M /trunk/man/manual.pdf

Includes Will's new DCM chapter.

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r567 | volkmar | 2006-07-03 15:33:08 +0100 (Mon, 03 Jul 2006) | 1 line
Changed paths:
   M /trunk/spm_regions.m

Hanneke den Ouden spotted an inconsistency in spm_regions output when data is
extracted from a mask image - fixed labelling of output graph
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r568 | stefan | 2006-07-04 18:59:56 +0100 (Tue, 04 Jul 2006) | 1 line
Changed paths:
   M /trunk/spm_eeg_tf.m

removed bug that computed wrong scaling factors
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r569 | karl | 2006-07-05 12:58:36 +0100 (Wed, 05 Jul 2006) | 1 line
Changed paths:
   M /trunk/spm_DEM.m
   M /trunk/spm_DEM_M_set.m
   A /trunk/spm_DEM_eval.m
   A /trunk/spm_MH.m
   A /trunk/spm_MH_reml.m
   A /trunk/spm_MH_reml_likelihood.m
   M /trunk/spm_hdm_priors.m
   M /trunk/spm_reml.m


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r570 | john | 2006-07-05 15:29:24 +0100 (Wed, 05 Jul 2006) | 10 lines
Changed paths:
   M /trunk/spm_maff.m
   M /trunk/spm_minmax.m
   M /trunk/spm_preproc.m

Hopefully made the segmentation code slightly more robust.
* Derivatives of MI changed (bug fixed)
* Masking out background voxels is now based on overlayed
  tissue probability maps. This appears to be a slightly
  better approach, but it means that the initial affine
  registration needs to be good.
* min-max routine ignores zero bin in the histogram. Histos
  for face or scalp-stripped data have a big peak at this point.


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r571 | john | 2006-07-07 13:23:02 +0100 (Fri, 07 Jul 2006) | 2 lines
Changed paths:
   M /trunk/spm_eeg_inv_model.m

* The cleanup flag was missing for writing segmented data.

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r572 | stefan | 2006-07-13 13:37:04 +0100 (Thu, 13 Jul 2006) | 1 line
Changed paths:
   M /trunk/toolbox/api_erp/spm_api_erp.fig
   M /trunk/toolbox/api_erp/spm_api_erp.m
   M /trunk/toolbox/api_erp/spm_dcm_erp_results.m
   A /trunk/toolbox/api_erp/spm_dcm_erp_viewspatial.fig
   A /trunk/toolbox/api_erp/spm_dcm_erp_viewspatial.m
   M /trunk/toolbox/api_erp/spm_gx_erp.m


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r573 | karl | 2006-07-18 18:05:21 +0100 (Tue, 18 Jul 2006) | 1 line
Changed paths:
   M /trunk/spm_DEM.m
   M /trunk/spm_DEM_M_set.m
   M /trunk/spm_DEM_eval.m
   M /trunk/spm_DEM_generate.m

Upgrade of DEM routines
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