Hi
I have been trying to use FormatConverter to output a BMRB deposition
file for my project and have had some problems with residue numbering.
Perhaps unusually the first residue of my protein is numbered 0 as it
is a cloning artefact and residue 1 is the native N-terminus of the
protein. Everything works fine in analysis with the start seq number of
the Chain "A" fragments box (in the Edit Molecular Systems) dialogue
set as 0.
However the Seq Id is 1 out (ie the first residue is 1) This
information overwrites the start seq number when I exports the shifts
and consequently all the residue numbers in the bmrb.csdep file are
wrong.
How can I rectify this?
Thanks
Huw
--
Huw Jenkins
School of Chemistry
University of Edinburgh
West Mains Road
Edinburgh, EH9 3JJ
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