On Fri, 14 Oct 2005, kamran kazemi wrote:
> do you know software for rotating a 3D image? beacuse my images are
> 16bits, when i rotate them by mricro? they becom 8bits? but it is
> important for me that images be on 16 bits
With SPMs low-level image manipulation functions (spm_imcalc, spm_vol,
spm_read_vols etc...) and some Matlab scripting it should not be too
difficult. However, I haven't written something up since in my environment
I prefer to make the software understand .mat files...
> kamran
>
> Volkmar Glauche <[log in to unmask]> wrote:
> Dear Kamran,
>
> the changes you apply to image orientation with SPM5s "reorient" button
> will only be visible in programs that fully support the Nifti
> or Analyze+.mat file format. This should work for FSL, FreeSurfer... but
> not for programs like mricro, that do not read the voxel-to-world
> coordinate mapping from .mat files. If you want to see them in mricro as
> you do in SPMs "world space" view, you have to reslice them - there were
> many posts to the mailing list about this topic.
>
> On Fri, 14 Oct 2005, kamran kazemi wrote:
>
> > i want to change the orintation of the 3D images on SPM5b, i do this and
> > change the orientation todesierd orientation, but the problem arise when
> > iwant to save the changes,
> >
> > i do this with click on the "reoient image" button,
>
> > but i couldn't see the changes on the MRIcro, also i could see this
> > changes on the SPM show
> >
> > Kind Regards
> > kamran
> >
> >
> > ---------------------------------
> > Yahoo! Music Unlimited - Access over 1 million songs. Try it free.
>
>
--
Volkmar Glauche
-
Department of Neurology [log in to unmask]
Universitaetsklinikum Freiburg Phone 49(0)761-270-5331
Breisacher Str. 64 Fax 49(0)761-270-5416
79106 Freiburg
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