Dear Anja,
> >If you have a deskulled template, then normalisation can work better.
>
> This is correct. It assumes though, that the deskulling works good.
> If it does not (tissue left over at the ears/nose) coregistration is
> more forgiving than normalization, hence my rationale.
The principle behind using deskulled data is the same as the motivation for
the "optimised VBM" approach of spatial normalisation. This involves
matching grey matter with grey matter.
Best regards,
-John
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