> May be my question is too straight forward!-I've
> generated my own priors and I would like to use them
> to segment my images. Where do I change the defaults?
If you are using SPM2, then you should be able to modify spm_defaults.m .
Alternatively, you could set a few global variables in Matlab before you run
the segmenting.
e.g.
global defaults
defaults.segment.estimate.priors = spm_get(3,'*.IMAGE','Select your priors');
> Also,I tried to move the templates out of the folder
> and then replace the ".minc" format with ".img" files
> which I obtained by running Christian Gaser's template
> creation script. Can anyone help me here!
There's no need to have your priors/templates etc as MINC format. All you
need to ensure is that the global variable defaults.segment.estimate.priors
is set appropriately.
Best regards,
-John
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