> Further question...The file that I am looking at ('blockfh.nii') has some
> things in it that I don't believe are possible to get out of AFNI.
> Specifically,
> the qform_code and sform_code are different, whereas the last line that
> references either one of them in my output code is 'sform_code =
> qform_code'.
>
> Does SPM modify input files? Did you modify this one by hand?
It modifies srow_x, srow_y and srow_z if the files are reoriented, realigned
etc. It also sets sform_code to 2, if it was previously 0.
Best regards,
-John
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