I'm not 100% sure but I think you need SPM99 to run EMS. It appears to be
looking for apriori\white.img, which exists for SPM99, but not for SPM2 or
SPM5b.
Best regards,
-John
On Wednesday 18 May 2005 23:26, Thomas Malone wrote:
> Dear SPMers,
>
> I'm still a very new SPM user, but if you have a few minutes, I was
> wondering if you might be able to help me with the following error in EMS
> when attempting segmentation:
>
> "Error reading information on: templates/T1.img Please check that it is
> in the correct format. SPM2 (timestamp)"
>
> In command Window:
> ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
>
>
> dataNames = [
> 'C:\Program
> Files\MATLAB704\work\Controls\ANALYZE\Brown^Alicia\1_4\Brown^Alicia_1_4.img
>'; ]
> use2D = 1
> maxBiasOrder = 4
> useMRF = 1
> updateMRFparams = 1
>
>
> Warning: Inputs must be character arrays or cell arrays of strings.
>
> > In fullfile at 31
>
> In ems_segment at 108
> In ems_segment>uiForEms_segment at 846
> In ems_segment at 90
>
> * - SPM2: spm_vol -------------------------------------------------
>
> Error reading information on:
> apriori\white.img
>
> Please check that it is in the correct format.
>
> ----------------------------------------- 17:22:44 - 18/05/2005
>
> ??? Error using ==> spm_vol>subfunc1
> Can't get volume information for 'apriori\white.img'
>
> Error in ==> spm_vol>subfunc2 at 51
> V = subfunc1(P);
>
> Error in ==> spm_vol at 37
> V = subfunc2(P);
>
> Error in ==> ems_segment at 117
> infoAtlas = spm_vol(atlasNames);
>
> Error in ==> ems_segment>uiForEms_segment at 846
> ems_segment(dataNames, use2D, maxBiasOrder, useMRF, ...
>
> Error in ==> ems_segment at 90
> uiForEms_segment
>
> ??? Error while evaluating uicontrol Callback.
>
> >> help help
>
> *--------------------------------------------------------------------------
>-------------------------------------------------------
>
> I'm running Matlab 7. I think I need to convert the T1.mnc to T1.img, yes?
> How? The
>
> I just installed SPM2 this past week.
>
> Thanks, everyone.
>
> Tom
>
>
> Thomas M. Malone
> Research Assistant
> Hoglund Brain Imaging Center
> MailStop 1052
> 3901 Rainbow Boulevard
> University of Kansas Medical Center
> Kansas City, KS 66160
>
> Phone: 913 588 9070
>
> http://www.kumc.edu/hoglund/
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