dear spm experts,
i am facing a somewhat bizarre display problem in spm.
i have skull stripped the SPGRs using trim_img( Matthew Brett's
script,available from MRC CBU, Cambridge) and BET : and the display
seems to have shrunk and chopped off two of the three views. is there
something that could be done to get back the full coronal and
horizontal views?
am attaching the spm display output for the relevant ss_tb_structural file.
thanks a lot for any help!
bhisma
p.s.
as an alternative, i have tried using MRIcro (Etc>Skull strip using
BET) to skull strip, before coregistering. however, i realise that the
orientation of the mean EPI and that of the skull stripped structural
made by MRIcro are opposite to one another.
I would be very grateful for any suggestion how to make these two
orientations same.
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Bhismadev Chakrabarti
Autism Research Centre,
University of Cambridge,
Cambridge, UK
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