Charles Loomis wrote:
> Hi Maniel,
>
> As Maarten pointed out it looks like the submitfilter is not correctly
Hi Cal,
does the /var/spool/pbs/submit_filter.pl in question come from your rpms
indirectly?
I note the script assumes that all its arguments are job scripts,
so either it should never have to see arguments like "-q short",
or it needs to be fixed...
> configured. If you use a submit filter (and you need it for MPI
> support), then you must put the full path and name of the script into
> the /var/spool/pbs/torque.cfg file a line like:
>
> SUBMITFILTER /full/path/to/script
>
> From Maarten's debugging it looks like you have this configuration, but
> either the script doesn't exist or has the wrong permissions. First
> check to see that it exists (example can be found on the MPI Wiki page).
> This script *must* be executable for all users. There is nothing
> sensitive in the script, so permissions like 0755 are best. If both of
> those are OK, then check that the script actually runs correctly. This
> you can do with a simple torque job submission. If the qsub produces no
> errors it should be OK. This filter is actually run by the qsub command
> with the user's privileges on all job submissions.
>
> Cheers.
>
> Cal
>
>
>
> Sotomayor, Maniel wrote:
>
>> Hello,
>>
>> I'm having problems after submitting jobs to my cluster. The jobs
>> successfully execute through qsub after installing MPICH. I'm having
>> errors when reading jobwrapper output. I checked the gocwiki that talks
>> about it, but have not solved it yet with them. I'm attaching the
>> logging info output. Can you help me solve this ?
>>
>> Sincerely,
>> ./MS
>>
|