Hi -
I'm not sure this will work. Instead I think you might need to introduce a
line break at the very end of each file.
Does this help
T
On Tue, 2 Aug 2005, Peter Kochunov wrote:
> Try openning them in text editor and introduing line breaks after each
> number.
>
> ----- Original Message -----
> From: "David Mack" <[log in to unmask]>
> To: <[log in to unmask]>
> Sent: Tuesday, August 02, 2005 8:47 AM
> Subject: [FSL] DTIfit problem
>
>
> >I am trying to run 7T rat dti data 128x128x12 with cygwin.
> > After running eddy current correction and merging the b0, I ran dtifit
> > using a hand drawn mask from fslview (nodif_brain_mask) the merged file
> > (data) and bves.txt and bvals.txt. I recieve the message:
> >
> > Errors: 0 128 0 128 0 12
> > 0 slices processed
> > 1 slices processed
> > 2 slices processed
> > 3 slices processed
> > 4 slices processed
> > 5 slices processed
> > 6 slices processed
> > 7 slices processed
> > 8 slices processed
> > 9 slices processed
> > 10 slices processed
> > 11 slices processed
> >
> > The output is blank. I realize this is probably a problem with my bvals
> > or bvecs file but right now the problem is escaping me. I have attached
> > the texts files. They were made using MSWord saving as .txt.
> >
> > Any suggestions would be appreciated.
> >
> > Thanks
> > Dave
> >
> >
>
>
> --------------------------------------------------------------------------------
>
>
> > 0.0000000e+00 1.0000000e+03 1.0000000e+03 1.0000000e+03 1.0000000e+03
> > 1.0000000e+03 1.0000000e+03
> >
> >
>
>
> --------------------------------------------------------------------------------
>
>
> > 0.0000000e+00 9.9999924e-01 0.0000000e+00 9.9999924e-01 -9.9999924e-01
> > 0.0000000e+00 9.9999924e-01
> > 0.0000000e+00 9.9999924e-01 9.9999924e-01 0.0000000e+00
> > 9.9999924e-01 -9.9999924e-01 0.0000000e+00
> > 0.0000000e+00 0.0000000e+00 9.9999924e-01 9.9999924e-01 0.0000000e+00
> > 9.9999924e-01 -9.9999924e-
>
--
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Tim Behrens
Centre for Functional MRI of the Brain
The John Radcliffe Hospital
Headley Way Oxford OX3 9DU
Oxford University
Work 01865 222782
Mobile 07980 884537
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