Thanks, Mark. I will give it a try.
Dolf
On Mon, 7 Mar 2005, Mark Jenkinson wrote:
> Hi,
>
> This is possible, but not something anyone has asked us for
> before. The schedule files in $FSLDIR/etc/flirtsch control
> this sort of behaviour (see FAQ). It is relatively
> straightforward to take one of these and modify it to do
> what you want. I'm attaching a modified version of
> sch2D_6dof (I've called it sch2D_5dof_norot) which normally
> does all 6 affine DOF in 2D, but now has the rotation
> removed. However, note that FLIRT is optimised for typical
> brain image registration and imposes some limits on the
> expected size of things like shears and scalings. If you
> have a lot of these in your image then you will probably
> need extra modification of the schedule file to make it
> work well. But for now try this schedule file and see if
> it works. If not, let us know.
>
> All the best,
> Mark
>
>
>
--
____________________
Adolf Pfefferbaum,MD
Neuroscience Program
SRI International
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