Cool I guess I dint load the example func into FSLView.It looks good and
can see where the activations are approximately.Thanks a lot
Shruthi
Hi
>
> did you load these into FSLView then? The web pages are generated
> using the axial views (only). If you want full interactive control,
> just load the thresholded images into FSLView together with an
> example func.
> You might also want to register the IC maps of interest into the MNI
> standard space.
> cheers
> christian
>
>
> On 21 Oct 2005, at 19:55, Shruthi Chakrapani wrote:
>
>> Hello
>>
>> I did as you asked me to do.Ran MELODIC with 'output full stats
>> folder'.I
>> could see all the thresholded images.But is there a way to view the
>> component maps(what we see on the web browser after doing Melodic)
>> on any
>> other view?
>>
>> Looking at the IC maps(on the web browser) we are not able to figure
>> out(approximately) which part of the brain region is activated.So we
>> wanted to see each component maps on all views and try to find out
>> approximately where on the brain the activations appear.Is there a
>> way to
>> do this.
>>
>> Thank you
>> Shruthi
>>
>> Hi
>>
>>>
>>> You can view the (unthresholded) ICA maps easily by loading
>>> melodic_IC intoo FSLView. Also, if you run melodic with the ---Ostats
>>> option (from the command line) or the 'output full stats folder' (in
>>> the GUI) then the bllah.ica folder will contain a stats folder with
>>> all the thresholded images in it. Again FSLView is quite nice for
>>> looking at these.
>>> cheers
>>> christian
>>>
>>>
>>> On 21 Oct 2005, at 18:43, Shruthi Chakrapani wrote:
>>>
>>>
>>>> Hello All
>>>>
>>>> I wanted to know if there is a way to view the MELODIC output in
>>>> any other
>>>> views or in all the three views(Axial,sagittal,Coronal).
>>>>
>>>> Thank you
>>>> Shruthi
>>>>
>>>>
>>>
>>> --
>>> Christian F. Beckmann
>>> Oxford University Centre for Functional
>>> Magnetic Resonance Imaging of the Brain,
>>> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
>>> Email: [log in to unmask] - http://www.fmrib.ox.ac.uk/
>>> ~beckmann/
>>> Phone: +44(0)1865 222551 Fax: +44(0)1865 222717
>>>
>>>
>>>
>>
>
> --
> Christian F. Beckmann
> Oxford University Centre for Functional
> Magnetic Resonance Imaging of the Brain,
> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
> Email: [log in to unmask] - http://www.fmrib.ox.ac.uk/~beckmann/
> Phone: +44(0)1865 222551 Fax: +44(0)1865 222717
>
>
>
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