Dear SIENA users
I have run SIENA with native T1 images that always resulted in the following
error message:
Error: nifti_image_read<T1_2002_halfwayto_scT1_2002_brain_seg>: cant
open header file
Error: nifti_image_open<T1_2002_halfwayto_scT1_2002_brain_seg>:
bad header info
Error: failed to open file T1_2002_halfwayto_scT1_2002_brain_seg
Error:: FslCloneHeader: Null pointer passed for FSLIO
dc: stack empty
but when images are first linearly normalised with SPM2 SIENA works well.
Questions:
Are there restrictions in SIENA concerning the orientation of the images?
Does SIENA reads only the headers or also the associated *.m files that
contain the
rotation parameters from reorientation in SPM?
It is recommended to run SIENA with linearly normalised and amount of issue
preserved images?
Are there other parameters in the native T1 images that are able to cause
problems with any procedure
implemented in SIENA?
Thanks a lot in advance
Best regards
Juergen
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Juergen Haenggi, Ph.D. student
Division of Psychiatry Research
Psychiatric University Hospital
University of Zurich, Switzerland
P.O. Box 1931
Lenggstrasse 31, 8032 Zurich
0041 44 384 26 10 (office phone)
0041 76 445 86 84 (mobile phone)
0041 44 384 26 86 (fax)
H 115 (office room number)
[log in to unmask] (division email)
http://www.dpr.unizh.ch/ (division website)
http://www.juergenhaenggi.ch (private website)
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