Hi,
I'm writing a program in which I would like to present
images in histograms. Can I call an FSL histogram
function in my program or can the histograms only be
produced from GUI?
I also wonder what exactely is meant by the sform
matrix. If I run eddy_correct on a patient with a
number of directions and b0 as reference, shouldn't
the sform matrix initially be identical for all
volumes? Or am I wrong?
Last question: Is there a way to know if the
eddy_correct has succeeded without looking at the
images? If I run it on some hundreds of patients I
would like to know if some didn't succeed without
going through all of the patients.
I would really appreciate your help.
Best regards,
Elin
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