JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for CCPNMR Archives


CCPNMR Archives

CCPNMR Archives


CCPNMR@JISCMAIL.AC.UK


View:

Message:

[

First

|

Previous

|

Next

|

Last

]

By Topic:

[

First

|

Previous

|

Next

|

Last

]

By Author:

[

First

|

Previous

|

Next

|

Last

]

Font:

Proportional Font

LISTSERV Archives

LISTSERV Archives

CCPNMR Home

CCPNMR Home

CCPNMR  April 2004

CCPNMR April 2004

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject:

Compilation of analysis on SGI, Irix 6.5.17, MIPS Pro 7.3 compiler, and Python2.3

From:

"Bruce D. Ray" <[log in to unmask]>

Reply-To:

CcpNmr software mailing list <[log in to unmask]>

Date:

Fri, 30 Apr 2004 18:37:43 +0100

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (169 lines)

As was the case with the Sun compilation posted previously, analysis
compiles quite nicely on an SGI running Irix 6.5.17 with MIPS Pro 7.3
compilers and Python 2.3


1. As before, installCode.py had to be edited to change all references
   from python2.2 to python2.3

2. OpenGL was developed by SGI and both fortran and c have openGL
   support complete with both the fortran and c glut libraries.
   However, I found that I some parts of this were not installed by
   default when I installed the compilers and the MIPS Pro 7.3
   development environment.  I had to go back into SGI's install
   system and examine the library settings on the MIPS Pro 7.3
   environment CD and the All Compilers CD to select all of the
   glut components.  I guess the moral of this is read the SGI
   release notes very carefully and cross check what gets installed.

3. Three different types of libraries are specified in Irix 6.5.17, o32,
   n32, and n64.  Unless there is some reason to use 64 bit addressing,
   n32 is the proper library to use.  However, this is in /usr/lib32
   Therefore, two additional lines in installCode.py had to be edited
   to specify this as follows:

          X11_LIB_FLAGS = -L$(X11_DIR)/lib32
          GL_LIB_FLAGS = -L$(GL_DIR)/lib32

4. The correct directory both for X11 and for OpenGL is /usr

5. I have tcl8.3.5, tk8.3.5, and python2.3 all installed in /usr/local

6. The SGI compiler gives more warnings than I saw on my Sun with Sun
   WorkShop.  Compilation warnings were as follows:

   a. for python_util.c :

cc-1116 cc: WARNING File = python_util.c, Line = 524
  Non-void function "set_python_double_array" (declared at line 500) should
          return a value.

  }
  ^

cc-1116 cc: WARNING File = python_util.c, Line = 560
  Non-void function "set_python_double_matrix" (declared at line 527) should
          return a value.

  }
  ^


   b. for mutex.c :

cc-1047 cc: WARNING File = /usr/include/sys/param.h, Line = 371
  Macro "MIN" (declared at line 121 of "macros.h") has an incompatible
          redefinition.

  #define MIN(a,b) (((a)<(b))?(a):(b))
          ^

cc-1047 cc: WARNING File = /usr/include/sys/param.h, Line = 372
  Macro "MAX" (declared at line 124 of "macros.h") has an incompatible
          redefinition.

  #define MAX(a,b) (((a)>(b))?(a):(b))
          ^


   c. for py_block_file.c :

cc-1174 cc: WARNING File = py_block_file.c, Line = 170
  The variable "i" was declared but never referenced.

      int i, n;
          ^


     d. for pdf_handler.c (more informative than the corresponding
        error message from the Sun):

cc-1140 cc: WARNING File = pdf_handler.c, Line = 88
  A value of type "void (*)()" cannot be used to initialize an entity of type
          "void (*)(Generic_ptr)".

        pdf_start_draw, pdf_end_draw, pdf_new_draw_range,

                        ^

     e. for ps_handler.c (more informative than the corresponding
        error message from the Sun):

cc-1140 cc: WARNING File = ps_handler.c, Line = 86
  A value of type "void (*)()" cannot be used to initialize an entity of type
          "void (*)(Generic_ptr)".

        ps_start_draw, ps_end_draw, ps_new_draw_range,
                       ^


     f. for method.c :

cc-1174 cc: WARNING File = method.c, Line = 104
  The variable "a" was declared but never referenced.

      float volume, a, b, c;
                    ^


     g. for py_slice_file.c :

cc-1174 cc: WARNING File = py_slice_file.c, Line = 101
  The variable "position" was declared but never referenced.

      float position[MAX_NDIM];
            ^

cc-1552 cc: WARNING File = py_slice_file.c, Line = 107
  The variable "handler" is set but never used.

      Generic_ptr handler;
                  ^




7. Three trivial loader warnings about sections that did not
   use /usr/lib32/libGLU.so were also given as follows:

cc -shared -o GlHandler.so -L/usr/lib32 -L/usr/local/lib -L/usr/local/lib
-L/usr/lib32 \
                python_util.o  utility.o  gl_handler.o  py_gl_handler.o
-lglut -lGLU -lGL -ltk8.3 -ltcl8.3 -lX11 -lXext -lm
ld32: WARNING 84 : /usr/lib32/libGLU.so is not used for resolving any symbol.


        cc -shared -o ContourFile.so -L/usr/lib32 -L/usr/local/lib
-L/usr/local/lib -L/usr/lib32 \
                contour_data.o  contour_levels.o  contour_style.o
contour_file.o  py_contour_levels.o  py_contour_style.o  py_contour_file.o
../global/python_util.o  ../global/utility.o  ../global/hash_list.o
../global/hash_table.o  ../global/mem_cache.o  ../global/mutex.o
../global/py_mem_cache.o  ../global/block_file.o  ../global/int_array.o
../global/py_block_file.o \
                ../global/contour.o  ../global/list.o ../global/gl_handler.o
 ../global/pdf_handler.o  ../global/ps_handler.o  ../global/py_gl_handler.o
 ../global/py_pdf_handler.o  ../global/py_ps_handler.o -lglut -lGLU -lGL
-ltk8.3 -ltcl8.3 -lX11 -lXext -lm
ld32: WARNING 84 : /usr/lib32/libGLU.so is not used for resolving any symbol.



        cc -shared -o WinPeakList.so -L/usr/lib32 -L/usr/local/lib
-L/usr/local/lib -L/usr/lib32 \
                method.o  peak.o  peak_list.o  symbol.o  win_peak_list.o
py_peak.o  py_peak_list.o  py_win_peak_list.o ../global/python_util.o
../global/utility.o  ../global/hash_list.o  ../global/hash_table.o
../global/mem_cache.o  ../global/mutex.o  ../global/py_mem_cache.o
../global/block_file.o  ../global/int_array.o  ../global/py_block_file.o \
                ../global/gl_handler.o  ../global/pdf_handler.o
../global/ps_handler.o  ../global/py_gl_handler.o
../global/py_pdf_handler.o  ../global/py_ps_handler.o -lglut -lGLU -lGL
-ltk8.3 -ltcl8.3 -lX11 -lXext -lm
ld32: WARNING 84 : /usr/lib32/libGLU.so is not used for resolving any symbol.



If the environment variables have all been set correctly,
analysis runs.

Top of Message | Previous Page | Permalink

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

April 2024
March 2024
February 2024
January 2024
December 2023
November 2023
October 2023
September 2023
August 2023
July 2023
June 2023
May 2023
April 2023
March 2023
February 2023
January 2023
December 2022
November 2022
October 2022
September 2022
August 2022
July 2022
June 2022
May 2022
April 2022
March 2022
February 2022
January 2022
December 2021
November 2021
October 2021
September 2021
August 2021
July 2021
June 2021
May 2021
April 2021
March 2021
February 2021
January 2021
December 2020
November 2020
October 2020
September 2020
August 2020
July 2020
June 2020
May 2020
April 2020
March 2020
February 2020
January 2020
December 2019
November 2019
October 2019
September 2019
August 2019
July 2019
June 2019
May 2019
April 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
March 2018
February 2018
January 2018
December 2017
November 2017
October 2017
September 2017
August 2017
July 2017
June 2017
May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
November 2016
October 2016
September 2016
August 2016
July 2016
June 2016
May 2016
April 2016
March 2016
February 2016
January 2016
December 2015
November 2015
October 2015
September 2015
August 2015
July 2015
June 2015
May 2015
April 2015
March 2015
February 2015
January 2015
December 2014
November 2014
October 2014
September 2014
August 2014
July 2014
June 2014
May 2014
April 2014
March 2014
February 2014
January 2014
December 2013
November 2013
October 2013
September 2013
August 2013
July 2013
June 2013
May 2013
April 2013
March 2013
February 2013
January 2013
December 2012
November 2012
October 2012
September 2012
August 2012
July 2012
June 2012
May 2012
April 2012
March 2012
February 2012
January 2012
December 2011
November 2011
October 2011
September 2011
August 2011
July 2011
June 2011
May 2011
April 2011
March 2011
February 2011
January 2011
December 2010
November 2010
October 2010
September 2010
August 2010
July 2010
June 2010
May 2010
April 2010
March 2010
February 2010
January 2010
December 2009
November 2009
October 2009
September 2009
August 2009
July 2009
June 2009
May 2009
April 2009
March 2009
February 2009
January 2009
December 2008
November 2008
October 2008
September 2008
August 2008
July 2008
June 2008
May 2008
April 2008
March 2008
February 2008
January 2008
December 2007
November 2007
October 2007
September 2007
August 2007
July 2007
June 2007
May 2007
April 2007
March 2007
February 2007
January 2007
December 2006
November 2006
October 2006
September 2006
August 2006
July 2006
June 2006
May 2006
April 2006
March 2006
February 2006
January 2006
December 2005
November 2005
October 2005
September 2005
August 2005
July 2005
June 2005
May 2005
April 2005
March 2005
February 2005
January 2005
December 2004
November 2004
October 2004
September 2004
August 2004
July 2004
June 2004
May 2004
April 2004
March 2004
February 2004
January 2004
December 2003
November 2003
October 2003
September 2003


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

For help and support help@jisc.ac.uk

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager