Hi,
Could you please supply some details about the system you are
running on. What operating system (include the version number - e.g.
redhat 8),
what cpu (e.g. Athlon 1800), how much RAM, how much swap space, how
much disk space, etc etc.
Mark
On Thursday, January 8, 2004, at 03:35 am, JONGCHUL YOUN wrote:
> Hi Mark.
>
> Thanks for your comment.
> But, I'm not familiar with compiling linux.
> I downloaded the file you mentioned. But, I could not
> handle this.
> Could you guide me some detail?
>
> Many thanks.
>
>
> --- Mark Jenkinson <[log in to unmask]> wrote: > Hi,
>>
>> Are you running this on a linux machine?
>> There appears to be a problem with FLIRT compiled on
>> Redhat 8 and 9. If
>> you are getting segmentation faults when running
>> flirt, then download
>> the non-optimised version from
>> www.fmrib.ox.ac.uk/fsldownloads/flirt_noopt
>> <http://www.fmrib.ox.ac.uk/fsldownloads/flirt_noopt>
>> which, although it
>> runs slower, should not crash. In the unlikely event
>> that it still
>> crashes, please post the details on the FSL email
>> list.
>>
>> All the best,
>> Mark
>>
>>
>> Jong Chul Youn wrote:
>>
>>> Hi.
>>>
>>> I set up FSL and run sienax for my 3D saggital SPGR
>>> MRI data.
>>> I preprocessed using ANALYZE and input analyze 7.5
>>> file.
>>> Many cases were done smoothly,but some of 3 D data
>>> showed error like this;
>>>
>>>
>>> [ocalhosyjc0811@lt ~]$ sienax
>>> /home/yjc0811/sampleT1T2/PRD/466/T1/0466 -r
>>> Could not open matrix file
>>> /home/yjc0811/sampleT1T2/PRD/466/T1/04662tal.mat
>>> dc: stack empty
>>> dc: stack empty
>>> dc: stack empty
>>> Could not open matrix file
>>> /home/yjc0811/sampleT1T2/PRD/466/T1/04662tal.mat
>>> Cannot read input-matrix
>>> Could not open matrix file
>>
>> /home/yjc0811/sampleT1T2/PRD/466/T1/04662tal_inv.mat
>>> Could not open matrix file
>>
>> /home/yjc0811/sampleT1T2/PRD/466/T1/04662tal_inv.mat
>>> Could not open matrix file
>>
>> /home/yjc0811/sampleT1T2/PRD/466/T1/04662tal_inv.mat
>>> dc: stack empty
>>> dc: stack empty
>>> dc: stack empty
>>> dc: stack empty
>>> 988369.375000
>>>
>>> It might be registration error. But, I can't solve
>>> this problem.
>>> Could you guide me to solve this problem?
>>>
>>> =====
>>> Jong Chul Youn, M.D
>>> Department of Neuropsychiatry
>>> Kyunggi provincial Hospital for the Elderly
>>> e-mail: [log in to unmask]
>>> tel. 82-31-288-0417
>>> fax. 82-31-288-0405
>>>
>>>
>
> =====
> Jong Chul Youn, M.D
> Department of Neuropsychiatry
> Kyunggi provincial Hospital for the Elderly
> e-mail: [log in to unmask]
> tel. 82-31-288-0417
> fax. 82-31-288-0405
>
>
>
>
>
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