we have been running into this problem as of late as well.
Any guidance as to how best tweak the bet parameters?
Jason
________________________________
From: FSL - FMRIB's Software Library on behalf of Xun Liu
Sent: Thu 7/22/2004 9:55 AM
To: [log in to unmask]
Subject: Re: [FSL] Registration question to Mark
Does the one give you problem having a lot of non-brain tissues around the
mouth after bet? I found that if I have this issue, the T1/MP-RAGE to MNI
template registration is usually messed up because the sagital view and
other views are easily being mis-recognized. Getting rid of those non-brain
tissues by tweaking the parameters of bet usually solve the problem.
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