That's right, yes. the script's call to slicer tells it to generate every
second slice in the graphics output. You can easily change this to
include all slices:
Edit fsl/bin/renderhighres
Find the line starting with "slicer"
Change the "-S 2 900" to "-A 900"
Cheers.
On Mon, 26 Apr 2004, Michael Lipton wrote:
> When I run render high res from ther utils button on the main FEAT GUI, the result
> cointains only 12 slices although both my fMRI data (EPI) and my highres data (TSE)
> have 23, 25 or 27 slices each. Is this an error? expected?
>
> Thanks,
>
> Michael
>
Stephen M. Smith DPhil
Associate Director, FMRIB and Analysis Research Coordinator
Oxford University Centre for Functional MRI of the Brain
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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