> Hi the SPM archives mentioned that one can use customized probability maps
> for segmentation of GM/WM/CSF. I generated some in analyze format and don't
> want to trouble myself with the conversion to MNC format. In the archives
> you also mentioned that one can just use the original analyze images. Do I
> just edit the segmentation code and have it select my analyze files? please
> give me more details on how to let SPM use my customized maps.
That should be all you need.
Templates etc were all distributed in MINC format because some people used
left-handed Analyze format, and others used right-handed (c.f. "neurological"
and "radiological" conventions). There was less confusion about handedness
of MINC files. Your templates should have the same handedness as your data,
so there should be fewer problems.
Best regards,
-John
--
Dr John Ashburner.
Functional Imaging Lab., 12 Queen Square, London WC1N 3BG, UK.
tel: +44 (0)20 78337491 or +44 (0)20 78373611 x4381
fax: +44 (0)20 78131420 http://www.fil.ion.ucl.ac.uk/~john
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