Steve,
Thanks for the quick reply. I'll do the concatination.
Dolf
On Fri, 19 Sep
2003, Stephen Smith wrote:
> Hi - sorry, there isn't a command-line argument for this. In fact, as
> well as testing slice thickness this also happens if the number of slices
> containing brain tissue is less than 10. Probably the easiest workaround
> is to concat the data onto itself in the z direction. This means
> everything will take longer, but should work. However, probably 2D
> segmentation should work ok anyway?
>
> You can concat in z with
>
> avwmerge -z tmpinput input input
>
> Thanks, Steve.
>
>
> On Thu, 18 Sep 2003, Adolf Pfefferbaum wrote:
>
> > I would like to apply mfast to a volume with a small number of slices
> > (5slices by 600x600 inplane). I get the following message:
> >
> > "Slice is too thick, 2D segmentation will be performed!"
> >
> > Can this be over ridden?
> >
> > Thanks,
> >
> > Dolf
> > ____________________
> > Adolf Pfefferbaum,MD
> > Neuroscience Program
> > SRI International
> > 650-859-2927 phone
> > 650-859-2743 FAX
> >
> >
> > CONFIDENTIALITY NOTICE: Information contained in this message and any
> > attachments is intended only for the adressee(s). If you believe that you
> > have received this message in error, please notify the sender immediately
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> > disclosure, or copying.
> >
>
> Stephen M. Smith MA DPhil CEng MIEE
> Associate Director, FMRIB and Analysis Research Coordinator
>
> Oxford University Centre for Functional MRI of the Brain
> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 222726 (fax 222717)
>
> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
>
--
____________________
Adolf Pfefferbaum,MD
Neuroscience Program
SRI International
650-859-2927 phone
650-859-2743 FAX
CONFIDENTIALITY NOTICE: Information contained in this message and any
attachments is intended only for the adressee(s). If you believe that you
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